Ecology Biology 3500
                                                                                                                Dr. Adams
Review Sheet Number 1
(Test 1):  

        I project NUMEROUS images in lecture, some from the book, but many not.  These
are organized in a manner to enhance the learning experience from the book, and I expect
you to understand and use these images, not only during lecture but outside of lecture as well.
They are all available 24/7 on my website at www.galeps.org/jadams

        Ecology Study of interactions between organisms and their environment.  Understand
that "environment" includes virtually EVERYTHING that the organism can interact with,
including individuals of their own species, all other organisms, and the physical environment
as well -- the air, water, soil, weather events, fire, temperature extremes, and even cataclysmic
events such as tidal waves, avalanches, volcanic eruptions (with all that comes with it: ash, lava,
and related effluvia), and, yes asteroid impacts.  Needless to say, these interactions are, in turn,
intimately tied into the evolution of the organisms, as all of these interactions are the natural
selective processes that shape the adaptations of the organisms through time.

Chapter 1:  What is Ecology?
    Overview:  can be studied on many levels -- individual, population, community, ecosystem,
and larger regional and even global interactions. Know definitions of these terms. We will progress
this semester from the population level interactions to large scale interactions.

Types of research: observational, experimentation and modelling

Some quick examples:
           Observational
    1.  MacArthur -- resource partitioning by forest warblers; we will do a related lab on bird feeding
            on bird feeding niche partitioning later in the semester
    2.  Nadkarni -- plant nutrient resources in the tropical rain forest, including epiphytes and the mats
            they form in the canopy; host trees can tap into the mat with adventitious roots.
           Experimentation:
    1.  Galen and increasing flower size/seed set driven by bumblebees for high elevation Polemonium
           viscosum (sky pilots); hand pollination and multiple pollinator flowers did not increase either

Climatic and Ecological Change: in the past and going forward
   Davis -- plant community changes through time; the soil pollen record in sediment

NATURAL HISTORY and EVOLUTION UNIT

Chapter 2: Life on Land
    Biomes -- major divisions (large scale communities) of the (terrestrial) environment
           Most are named based on plant composition, because plants for the foundation for any
                community (see Fig. 2.1)
        Major atmospheric determinants of biome (community) composition: 
            1.  Temperature -- heating by the sun; particularly important are the extremes
            2.  Moisture -- precipitation (and humidity/dew points); again, the extremes are important
            3.  Atmospheric Circulation (which is an important controller of temp. and precip.)
        To keep in mind:  geographic variation in temperature and precipitation is complex, and
            there is no single one item that controls temp and amount of precip on Earth's surface
        Additional determining components:  Soil composition, of course (see below).

        Make sure to read about climate diagrams (pgs. 15-17), and be able to interpret them.
Also understand, however, that a climate diagram represents average climate, and that
individual years can vary a lot, leading to moist years versus drought years (see pgs. 41-42).

    Soils -- complex mixtures of living and non-living material, typically with distinctive layering.
            This, of course, is another major determinant of biome composition
        Horizons:  O, A, E, B, C (and the underlying bedrock - R)
            Understand general characteristics of each.
            Horizons may be of differing depths, depending on many factors (precip and leaching,
                current biological activity, disturbance by man [tilling], etc.)
            Dr. Gina Kertulis-Tartar will give a detailed discussion of this important topic the first
                week in lab.  You will be expected to know those details for Test 1.

The Natural History of Biomes:  For each of the listed biomes, you should know basic
    characteristics.  These include: amount and timing (wet/dry seasonality) of precipitation,
    temperature driven seasonality (if apparent), location on the face of the planet, characteristics
    of the soils, and typical floral and faunal elements (and what major groups of organisms are
    lacking, such as reptiles/amphibians in subarctic/arctic)

Certain aspects to keep in mind as we go through:
    Epiphytes and epiphytic growth (why do some plants do this, which ecosystems have this
        type of growth and why), wet/dry seasons and occurrence of drought, parallel evolution of
        organisms with similar forms in similar habitats in different places in the world (eg., cacti
        and certain euphorbs in New World versus African deserts, respectively).

    Types of biomes: (this is not an exhaustive list, though all major biomes are listed here)
        The Tropics
            What distinguishes tropical biomes from temperate (or subarctic/arctic) types?
            Rain Forest, Dry Forest, Savanna (not listed are higher elevation biomes, which I
            WILL introduce you to and expect you to know something about)
        The Desert: 
           
Both tropical and temperate deserts (and arctic tundra is, in many respects, a desert)
        Temperate Biomes:
            Mediterranean (woodlands/shrub-, scrublands), Grassland, Forest (includes a
                variety of subsets: deciduous, mixed, and even rain)
        The Subarctic and Arctic:
            Boreal Forest (Taiga), Tundra

        Be aware that, in general, with higher latitude (tropics to the arctic) comes cooler temps.;
similar temperature gradients occur, with shifts in biome composition, with higher altitude.  We
will, for example, talk about alpine taiga and tundra (in essence, alpine islands) in addition to
arctic taiga and tundra

    Mountains:  though islands typically make us think of a piece of land surrounded by water,
mountaintops, in essence, are islands "in the sky".  This includes the higher elevation tropics I
mention above.  Note the convergence between tropical alpine plants indicated on page 40.
Even ponds and lakes are actually islands for the aquatic organisms that inhabit them (see below).

Chapter 3: Life in Water

    Why is water SO important? solvent, temp. buffer, adhesive/cohesive, reactant/product,
            lubricant, less dense as a solid than as a cold liquid
    The Hydrologic Cycle -- evaporation-precipitation; would happen without organisms.
        Organisms, in essence, temporarily but continuously insert themselves into the cycle.
        Turnover time:  amount of time for a particular reservoir (body) of water to be completely
            renewed (recycled).  Some rivers can be as fast as 2 weeks, and even the entire 1.3
            billion km3 of water in the oceans is turned over in 3100 years.

    Aquatic Biomes -- again, for each you should know basic characteristics:
        distribution on the planet, typical floral and faunal elements.
    Major influencing factors:  temperature (including extremes, though water buffers temp changes),
        salinity, light, wind, oxygen, nutrient availability (Note: moisture/precipitation NOT in the list --
        we are, after all, talking about aquatic ecosystems!!  Moisture only becomes important
        when the water is gone or almost gone.  The original source of the water is precipitation, and
        continuously supplies the water to the aquatic ecosystems to keep them in balance.)
    Currents/tides (affected by wind, earth's rotation, moon/sun, and of course gravity for rivers)

    Biomes (not an exhaustive list):
        Marine ("Salt Water"):  currents play a major role in influencing temperature distribution
            Oceanic:  divided into several zones   
                Pelagic -- open waters (not including interactions with the ocean floor)
                         includes epipelagic, mesopelagic, bathypelagic, abyssal, hadal
                Benthic -- bottom habitat
                         deep ocean bottom:  thermal vent communities, w/ chemosynthesis in
                                bacteria as the producers for this community
            Neritic (continental shelf): from shore to about 200m deep
            Intertidal (littoral): the shoreline -- the epitome of the extreme ecotone
           
            Kelp & Coral -- in the neritic zone
                Kelp tend to be in temperate coastal waters; coral in tropical coastal water
                    Coral communities rival tropical rain forest in diversity (and productivity)

            The Intertidal: the most extreme ecotone
                low, high, spring, neap tides; forces driving tides -- sun, moon and local geography
                    Ranges from: supratidal fringe to subtidal zone; zonation of species obvious.
                    Height of tides and waves impact structure/diversity
                    Diversity influenced by rock (more diverse) or sand (less) diverse
                    Tide pools can experience significant extremes of temperature and salinity
                Estuaries:  where rivers meet the sea; extreme salinity changes, technically part of
                        the intertidal
 
            Salt Marshes and Mangroves -- in the intertidal zone
                    As with kelp and coral, salt marshes tend to be in temperate intertidals; mangroves
                        in tropical intertidals.                 


   "Fresh" Water -- although much less salinity than marine environments, clearly "fresh" water
            contains dissolved minerals as well, and can be very variable between rivers/lakes
      Rivers and Streams:
            Length/width, speed/direction of flow; varies depending on availability of ground-
                    water/precipitation/snow melt. 
                Maximum/mininum flow (active vs. wetted channels); flooding.
            Stratification -- riparian area; water column, benthic/hyporheic/phreatic zones       
            Oxygen content inversely correlated with temperature, with cold water being richest in O2
      Lakes:
            Littoral zone; Limnetic zone with epi-/meta-/hypolimnion; benthic zone
                Seasonal temperature turnover
            Oligotrophic and euthrophic lakes.

    Integrity (health) of aquatic systems:  assessment is done by species richness and using
        indicator species.